Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| PAAD | rs75876430 | chr1:227661157 | A/G | 5.58E-13 | 178 | 15.33 | 15.97 | 1.37 | KM Plot |
| PAAD | rs75895872 | chr11:125598064 | A/C | 0.00011 | 177 | 16.08 | 14.18 | 5.03 | KM Plot |
| PAAD | rs7591477 | chr2:128523040 | G/C | 7.9E-10 | 178 | 15.62 | 12.6 | 2.2 | KM Plot |
| PAAD | rs75948705 | chr1:227510285 | G/A | 3.22E-5 | 178 | 15.55 | 15.43 | 3.9 | KM Plot |
| PAAD | rs75961893 | chr2:70476833 | A/T | 0 | 178 | 15.37 | 17.4 | 1.03 | KM Plot |
| PAAD | rs75972256 | chr1:227605097 | C/T | 6.4E-5 | 175 | 15.47 | 15.65 | 3.9 | KM Plot |
| PAAD | rs7597473 | chr2:70487456 | A/G | 0 | 178 | 15.33 | 18.43 | 1.03 | KM Plot |
| PAAD | rs75979228 | chr5:60228016 | A/C | 6.96E-5 | 176 | 15.27 | 16.17 | 4.68 | KM Plot |
| PAAD | rs7600279 | chr2:217927600 | C/T | 3.09E-8 | 170 | 15.5 | 15.27 | 5.97 | KM Plot |
| PAAD | rs76012336 | chr11:125622366 | C/T | 9.66E-5 | 177 | 16.03 | 12.2 | 4.1 | KM Plot |
| PAAD | rs76046364 | chr1:227439222 | A/G | 3.22E-5 | 178 | 15.55 | 15.43 | 3.9 | KM Plot |
| PAAD | rs76075584 | chr11:49776343 | CT/C | 1.68E-5 | 177 | 15.4 | 15.72 | 0.4 | KM Plot |
| PAAD | rs7607865 | chr2:70493570 | C/T | 0 | 178 | 1.03 | 18.43 | 15.33 | KM Plot |
| PAAD | rs76132272 | chr1:227456065 | C/T | 3.22E-5 | 178 | 15.55 | 15.43 | 3.9 | KM Plot |
| PAAD | rs76146925 | chr1:227539529 | C/A | 1.03E-5 | 175 | 15.55 | 15.65 | 3.9 | KM Plot |